{
  "_id": "6a275d6a24555f66ed531bfd",
  "Package": "preMetabolizer",
  "Title": "A Utility Package for the streamMetabolizer Package",
  "Version": "0.0.0.9000",
  "Authors@R": "person(\"Connor\", \"Brown\", , \"ConnorBrown1996@gmail.com\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-9680-8930\"))",
  "Description": "Tools for preparing environmental time series before\nfitting stream metabolism models. The package includes helpers\nfor downloading meteorological and elevation data, aligning\nirregular observations, converting units, and calculating\nlight, pressure, dissolved gas, and water property inputs for\nstreamMetabolizer.",
  "License": "AGPL (>= 3)",
  "URL": "https://connorb.github.io/preMetabolizer/,\nhttps://github.com/ConnorB/preMetabolizer",
  "BugReports": "https://github.com/ConnorB/preMetabolizer/issues",
  "VignetteBuilder": "quarto",
  "Config/testthat/edition": "3",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "Roxygen": "list(markdown = TRUE)",
  "Config/roxygen2/version": "8.0.0.9000",
  "RoxygenNote": "8.0.0.9000",
  "Config/pak/sysreqs": "libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev\nlibicu-dev libssl-dev libproj-dev libsqlite3-dev\nlibudunits2-dev libx11-dev",
  "Repository": "https://connorb.r-universe.dev",
  "Date/Publication": "2026-06-08 23:54:31 UTC",
  "RemoteUrl": "https://github.com/ConnorB/preMetabolizer",
  "RemoteRef": "HEAD",
  "RemoteSha": "b48a794026989efe6a91a360707c4efbec2e38ba",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-06-09 00:18:52 UTC",
    "User": "root"
  },
  "Author": "Connor Brown [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-9680-8930>)",
  "Maintainer": "Connor Brown <ConnorBrown1996@gmail.com>",
  "MD5sum": "6bd1405503de9880157e579e6745a48d",
  "_user": "connorb",
  "_type": "src",
  "_file": "preMetabolizer_0.0.0.9000.tar.gz",
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  "_sha256": "0590a8bb97753042590963ba0b93c80c8de1b75ee3eb0b4f9798362e833cf0fa",
  "_created": "2026-06-09T00:18:52.000Z",
  "_published": "2026-06-09T00:25:14.152Z",
  "_distro": "noble",
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  "_buildurl": "https://github.com/r-universe/connorb/actions/runs/27175355577",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/ConnorB/preMetabolizer",
  "_commit": {
    "id": "b48a794026989efe6a91a360707c4efbec2e38ba",
    "author": "Connor Brown <connorbrown1996@gmail.com>",
    "committer": "Connor Brown <connorbrown1996@gmail.com>",
    "message": "Update calc_N2Osat.R\n",
    "time": 1780962871
  },
  "_maintainer": {
    "name": "Connor Brown",
    "email": "connorbrown1996@gmail.com",
    "login": "connorb",
    "mastodon": "@connor@fediscience.org",
    "bluesky": "@connorbrown.bsky.social",
    "orcid": "0000-0002-9680-8930",
    "twitter": "@eco_conn",
    "description": "Aquatic Ecologist | PhD Candidate | University of Kansas | #AIMS | 🏳️‍🌈 ",
    "uuid": 1915544
  },
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  "_dependencies": [
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      "version": ">= 4.1.0",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
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    {
      "package": "lubridate",
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    },
    {
      "package": "dplyr",
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    },
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    },
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      "package": "httr2",
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    },
    {
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    },
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    },
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    },
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  "_owner": "connorb",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
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      "week": "2026-16",
      "n": 2
    },
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    },
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  ],
  "_tags": [],
  "_topics": [
    "dissolved-oxygen",
    "hydrology",
    "nasa",
    "noaa",
    "stream-metabolism",
    "usgs",
    "water-data",
    "quarto",
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  "_stars": 0,
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    "type": "user",
    "name": "Connor Brown",
    "description": "Aquatic Ecologist | PhD Candidate | University of Kansas | #AIMS | 🏳️‍🌈 "
  },
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    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/preMetabolizer"
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  "_devurl": "https://github.com/connorb/premetabolizer",
  "_pkgdown": "https://connorb.github.io/preMetabolizer/",
  "_searchresults": 19,
  "_quarto": true,
  "_rbuild": "4.6.0",
  "_assets": [
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    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
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    "extra/NEWS.txt",
    "extra/preMetabolizer.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
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  "_cranurl": false,
  "_exports": [
    "calc_bin_width",
    "calc_CH4sat",
    "calc_CO2_mgL",
    "calc_CO2_molKg",
    "calc_CO2sat",
    "calc_cv",
    "calc_exceedance_prob",
    "calc_K0",
    "calc_mode",
    "calc_N2Osat",
    "calc_O2sat",
    "calc_par",
    "calc_vapor_press",
    "calc_water_density",
    "calc_water_height",
    "cdo_data",
    "cdo_datacategories",
    "cdo_datasets",
    "cdo_datatypes",
    "cdo_locationcategories",
    "cdo_locations",
    "cdo_request_count",
    "cdo_reset_request_count",
    "cdo_stations",
    "closest_noaa_stations",
    "convert_flow",
    "convert_from_solar_time",
    "convert_pressure",
    "convert_to_solar_time",
    "correct_bp",
    "even_timesteps",
    "flag_z",
    "get_ghcnh",
    "get_nasa_data",
    "get_noaa_stations",
    "get_season",
    "get_usgs_elev",
    "iem_current",
    "iem_daily",
    "iem_networks",
    "iem_obhistory",
    "iem_station",
    "iem_stations",
    "ks_meso_fw13",
    "ks_meso_most_recent",
    "ks_meso_station_activity",
    "ks_meso_stations",
    "ks_meso_timeseries",
    "ks_meso_vars",
    "ncei_bbox",
    "ncei_data",
    "ncei_datasets",
    "ncei_stations",
    "pCO2_to_xCO2",
    "rcpp_calc_exceedance_prob",
    "read_shp",
    "tex_meso_current",
    "tex_meso_stations",
    "tex_meso_timeseries",
    "xCO2_to_pCO2"
  ],
  "_datasets": [
    {
      "name": "french_creek",
      "title": "French Creek stream metabolism data",
      "object": "french_creek",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "datetime",
        "sonde",
        "temp_C",
        "DO_mgL"
      ],
      "rows": 10883,
      "table": true,
      "tojson": true
    },
    {
      "name": "kings_discharge",
      "title": "Kings Creek daily water data",
      "object": "kings_discharge",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "monitoring_location_id",
        "time",
        "value",
        "parameter_code",
        "qualifier"
      ],
      "rows": 716,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "preMetabolizer-package",
      "title": "preMetabolizer: Prepare data for stream metabolism modeling",
      "topics": [
        "preMetabolizer-package",
        "preMetabolizer"
      ]
    },
    {
      "page": "calc_bin_width",
      "title": "Calculate histogram bin width",
      "topics": [
        "calc_bin_width"
      ]
    },
    {
      "page": "calc_CH4sat",
      "title": "Calculate dissolved methane saturation",
      "topics": [
        "calc_CH4sat"
      ]
    },
    {
      "page": "calc_CO2_mgL",
      "title": "Calculate dissolved CO2 concentration in mg/L",
      "topics": [
        "calc_CO2_mgL"
      ]
    },
    {
      "page": "calc_CO2_molKg",
      "title": "Calculate dissolved CO2 concentration in mol/kg",
      "topics": [
        "calc_CO2_molKg"
      ]
    },
    {
      "page": "calc_CO2sat",
      "title": "Calculate dissolved carbon dioxide saturation",
      "topics": [
        "calc_CO2sat"
      ]
    },
    {
      "page": "calc_cv",
      "title": "Calculate the coefficient of variation",
      "topics": [
        "calc_cv"
      ]
    },
    {
      "page": "calc_exceedance_prob",
      "title": "Calculate flow exceedance probabilities",
      "topics": [
        "calc_exceedance_prob"
      ]
    },
    {
      "page": "calc_K0",
      "title": "Calculate the CO2 solubility coefficient",
      "topics": [
        "calc_K0"
      ]
    },
    {
      "page": "calc_mode",
      "title": "Calculate the mode of a vector",
      "topics": [
        "calc_mode"
      ]
    },
    {
      "page": "calc_N2Osat",
      "title": "Calculate dissolved nitrous oxide saturation",
      "topics": [
        "calc_N2Osat"
      ]
    },
    {
      "page": "calc_O2sat",
      "title": "Calculate dissolved oxygen saturation",
      "topics": [
        "calc_O2sat"
      ]
    },
    {
      "page": "calc_par",
      "title": "Calculate modeled photosynthetically active radiation",
      "topics": [
        "calc_par"
      ]
    },
    {
      "page": "calc_vapor_press",
      "title": "Calculate water vapor pressure",
      "topics": [
        "calc_vapor_press"
      ]
    },
    {
      "page": "calc_water_density",
      "title": "Calculate water density",
      "topics": [
        "calc_water_density"
      ]
    },
    {
      "page": "calc_water_height",
      "title": "Calculate water height from pressure",
      "topics": [
        "calc_water_height"
      ]
    },
    {
      "page": "cdo",
      "title": "Query the NCEI Climate Data Online (CDO) Web Services v2 API",
      "topics": [
        "cdo",
        "cdo_data",
        "cdo_datacategories",
        "cdo_datasets",
        "cdo_datatypes",
        "cdo_locationcategories",
        "cdo_locations",
        "cdo_stations"
      ]
    },
    {
      "page": "cdo_request_count",
      "title": "Inspect and reset the NCEI CDO session request counter",
      "topics": [
        "cdo_request_count",
        "cdo_reset_request_count"
      ]
    },
    {
      "page": "closest_noaa_stations",
      "title": "Find NOAA stations near a location",
      "topics": [
        "closest_noaa_stations"
      ]
    },
    {
      "page": "convert_flow",
      "title": "Convert stream discharge between units",
      "topics": [
        "convert_flow"
      ]
    },
    {
      "page": "convert_pressure",
      "title": "Convert barometric pressure between units",
      "topics": [
        "convert_pressure"
      ]
    },
    {
      "page": "convert_to_solar_time",
      "title": "Convert a datetime to local solar time",
      "topics": [
        "convert_from_solar_time",
        "convert_to_solar_time"
      ]
    },
    {
      "page": "correct_bp",
      "title": "Correct barometric pressure for elevation change",
      "topics": [
        "correct_bp"
      ]
    },
    {
      "page": "even_timesteps",
      "title": "Fill missing rows in an even time series",
      "topics": [
        "even_timesteps"
      ]
    },
    {
      "page": "flag_z",
      "title": "Flag outliers with robust Z-scores",
      "topics": [
        "flag_z"
      ]
    },
    {
      "page": "french_creek",
      "title": "French Creek stream metabolism data",
      "topics": [
        "french_creek"
      ]
    },
    {
      "page": "get_ghcnh",
      "title": "Get GHCNh hourly observations",
      "topics": [
        "get_ghcnh"
      ]
    },
    {
      "page": "get_nasa_data",
      "title": "Download NASA POWER hourly data",
      "topics": [
        "get_nasa_data"
      ]
    },
    {
      "page": "get_noaa_stations",
      "title": "Get NOAA station information",
      "topics": [
        "get_noaa_stations"
      ]
    },
    {
      "page": "get_season",
      "title": "Determine the astronomical season from a date",
      "topics": [
        "get_season"
      ]
    },
    {
      "page": "get_usgs_elev",
      "title": "Get elevation from the USGS Elevation Point Query Service",
      "topics": [
        "get_usgs_elev"
      ]
    },
    {
      "page": "iem_current",
      "title": "Get current Iowa Environmental Mesonet observations",
      "topics": [
        "iem_current"
      ]
    },
    {
      "page": "iem_daily",
      "title": "Get Iowa Environmental Mesonet daily summaries",
      "topics": [
        "iem_daily"
      ]
    },
    {
      "page": "iem_networks",
      "title": "Get Iowa Environmental Mesonet network identifiers",
      "topics": [
        "iem_networks"
      ]
    },
    {
      "page": "iem_obhistory",
      "title": "Get one day of Iowa Environmental Mesonet observations",
      "topics": [
        "iem_obhistory"
      ]
    },
    {
      "page": "iem_stations",
      "title": "Get Iowa Environmental Mesonet station metadata",
      "topics": [
        "iem_station",
        "iem_stations"
      ]
    },
    {
      "page": "kings_discharge",
      "title": "Kings Creek daily water data",
      "topics": [
        "kings_discharge"
      ]
    },
    {
      "page": "ks_meso_fw13",
      "title": "Get Kansas Mesonet FW13 data",
      "topics": [
        "ks_meso_fw13"
      ]
    },
    {
      "page": "ks_meso_most_recent",
      "title": "Get most recent Kansas Mesonet data timestamp",
      "topics": [
        "ks_meso_most_recent"
      ]
    },
    {
      "page": "ks_meso_station_activity",
      "title": "Get Kansas Mesonet station activity",
      "topics": [
        "ks_meso_station_activity"
      ]
    },
    {
      "page": "ks_meso_stations",
      "title": "Get Kansas Mesonet station information",
      "topics": [
        "ks_meso_stations"
      ]
    },
    {
      "page": "ks_meso_timeseries",
      "title": "Get Kansas Mesonet time-series data",
      "topics": [
        "ks_meso_timeseries"
      ]
    },
    {
      "page": "ks_meso_vars",
      "title": "Fetch Kansas Mesonet variable metadata",
      "topics": [
        "ks_meso_vars"
      ]
    },
    {
      "page": "ncei_bbox",
      "title": "Compute a bounding box around a point",
      "topics": [
        "ncei_bbox"
      ]
    },
    {
      "page": "ncei_data",
      "title": "Get data from the NCEI Data Service API",
      "topics": [
        "ncei_data"
      ]
    },
    {
      "page": "ncei_datasets",
      "title": "List available NCEI datasets",
      "topics": [
        "ncei_datasets"
      ]
    },
    {
      "page": "ncei_stations",
      "title": "Search for NCEI weather stations",
      "topics": [
        "ncei_stations"
      ]
    },
    {
      "page": "pCO2_to_xCO2",
      "title": "Convert CO2 partial pressure to mole fraction",
      "topics": [
        "pCO2_to_xCO2"
      ]
    },
    {
      "page": "rcpp_calc_exceedance_prob",
      "title": "Calculate flow exceedance probabilities with C++",
      "topics": [
        "rcpp_calc_exceedance_prob"
      ]
    },
    {
      "page": "read_shp",
      "title": "Read a shapefile or zipped shapefile",
      "topics": [
        "read_shp"
      ]
    },
    {
      "page": "tex_meso_current",
      "title": "Get current TexMesonet data",
      "topics": [
        "tex_meso_current"
      ]
    },
    {
      "page": "tex_meso_stations",
      "title": "Get TexMesonet station information",
      "topics": [
        "tex_meso_stations"
      ]
    },
    {
      "page": "tex_meso_timeseries",
      "title": "Get recent TexMesonet time-series data",
      "topics": [
        "tex_meso_timeseries"
      ]
    },
    {
      "page": "xCO2_to_pCO2",
      "title": "Convert CO2 mole fraction to partial pressure",
      "topics": [
        "xCO2_to_pCO2"
      ]
    }
  ],
  "_readme": "https://github.com/ConnorB/preMetabolizer/raw/HEAD/README.md",
  "_rundeps": [
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